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  5. GRMZM5G849971

GRMZM5G849971


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM5G849971
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
96927 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g60637 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g53140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g13537 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G043900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G239300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G272100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Orthogroups_2024-Update
Glyma.16G049800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G221300 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G113330.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os09g24680 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g29360 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g08140 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
MA_483636g0010 No alias (at3g61170 : 684.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
Potri.001G217600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G058700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.004G124400 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G245300 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.013G044700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G083900 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G091600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G263300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.1G272500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G001800.1 No alias RNA editing factor *(ELI1) 0.03 Orthogroups_2024-Update
Seita.2G247200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G302700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G168900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.4G218400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.5G357300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G360300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G361000.1 No alias RNA editing factor *(MEF10) 0.03 Orthogroups_2024-Update
Seita.5G460300.1 No alias RNA editing factor *(OTP72) 0.04 Orthogroups_2024-Update
Seita.6G159500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G165500.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.7G298200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G068200.1 No alias RNA editing factor *(DEK36) 0.04 Orthogroups_2024-Update
Seita.9G151300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G341000.1 No alias RNA editing factor *(MEF25) 0.03 Orthogroups_2024-Update
Seita.9G355700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G001200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G069300.2 No alias RNA editing factor *(DEK36) 0.03 Orthogroups_2024-Update
Sobic.001G149100.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.001G151300.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.001G212200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G312700.1 No alias RNA editing factor *(MEF25) 0.04 Orthogroups_2024-Update
Sobic.001G347100.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G436600.3 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.001G478900.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G200500.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G292300.2 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.002G358900.3 No alias RNA editing factor *(OTP90) 0.03 Orthogroups_2024-Update
Sobic.002G389200.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G030100.1 No alias RNA editing factor *(CWM1) 0.05 Orthogroups_2024-Update
Sobic.003G047400.1 No alias RNA editing factor *(OTP81) 0.05 Orthogroups_2024-Update
Sobic.003G142400.2 No alias RNA editing factor *(PGN) 0.08 Orthogroups_2024-Update
Sobic.003G277100.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.003G333200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.003G336400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G337200.1 No alias RNA editing factor *(MEF10) 0.04 Orthogroups_2024-Update
Sobic.004G051600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G053100.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.004G141600.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.004G174800.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G199400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G217900.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G266300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G282000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G290400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G312000.1 No alias RNA editing factor *(CLB19) 0.03 Orthogroups_2024-Update
Sobic.005G110550.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G210700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G069100.3 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.006G146400.4 No alias RNA editing factor *(MEF12) 0.04 Orthogroups_2024-Update
Sobic.007G006800.3 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.007G201400.1 No alias RNA editing factor *(DOT4) 0.02 Orthogroups_2024-Update
Sobic.007G208400.1 No alias RNA editing factor *(REME1) 0.04 Orthogroups_2024-Update
Sobic.008G009000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.008G066900.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.008G179000.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.009G116400.4 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G136200.1 No alias RNA editing factor *(MEF32) 0.06 Orthogroups_2024-Update
Sobic.009G155400.3 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.010G066900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.010G067000.1 No alias RNA editing factor *(MEF29) 0.08 Orthogroups_2024-Update
Sobic.010G190900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G258600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g094850 No alias Pentatricopeptide repeat superfamily protein, putative... 0.02 Orthogroups_2024-Update
Solyc03g007840 No alias Pentatricopeptide repeat-containing protein, putative... 0.04 Orthogroups_2024-Update
Solyc03g097850 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc07g042760 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc09g009950 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc11g006700 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc11g067210 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen00g008750 No alias PPR repeat 0.03 Orthogroups_2024-Update
Sopen01g054250 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen03g026730 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen03g029160 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen04g008620 No alias PPR repeat 0.04 Orthogroups_2024-Update
Sopen04g022860 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen07g001950 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen10g004410 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen11g001900 No alias PPR repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
CC GO:0030915 Smc5-Smc6 complex IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
CC GO:0106068 SUMO ligase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 414 438
IPR002885 Pentatricopeptide_repeat 141 169
IPR002885 Pentatricopeptide_repeat 241 271
IPR002885 Pentatricopeptide_repeat 107 139
IPR002885 Pentatricopeptide_repeat 340 387
IPR032867 DYW_dom 513 637
No external refs found!