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  5. GRMZM5G851564

GRMZM5G851564


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0009208 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM5G851564
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
PSME_00052954-RA No alias (at4g13650 : 543.0) Pentatricopeptide repeat (PPR)... 0.01 Orthogroups_2024-Update
Sobic.009G245600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen02g017800 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 324 374
IPR002885 Pentatricopeptide_repeat 428 475
IPR002885 Pentatricopeptide_repeat 224 250
IPR002885 Pentatricopeptide_repeat 93 120
IPR002885 Pentatricopeptide_repeat 121 151
IPR002885 Pentatricopeptide_repeat 502 525
No external refs found!