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  5. GRMZM5G851929

GRMZM5G851929


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0013309 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0013309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM5G851929
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Sobic.002G235600.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 449 574
IPR002885 Pentatricopeptide_repeat 173 219
IPR002885 Pentatricopeptide_repeat 279 323
IPR002885 Pentatricopeptide_repeat 249 269
IPR002885 Pentatricopeptide_repeat 343 374
No external refs found!