1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At1g70170

At1g70170


Description : Metalloendoproteinase 2-MMP [Source:UniProtKB/Swiss-Prot;Acc:O04529]


Gene families : OG_42_0000704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g70170
Cluster HCCA clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
At4g16640 No alias Metalloendoproteinase 1-MMP... 0.03 Orthogroups_2024-Update
Bradi1g44690 No alias Matrixin family protein 0.02 Orthogroups_2024-Update
GRMZM2G179768 No alias matrix metalloproteinase 0.03 Orthogroups_2024-Update
Glyma.02G028700 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G076510.1 No alias M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase... 0.03 Orthogroups_2024-Update
Seita.4G106300.1 No alias M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase... 0.04 Orthogroups_2024-Update
Solyc08g078550 No alias Metalloendoproteinase 1, putative (AHRD V3.3 *** B9T8P6_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA InterProScan predictions
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
CC GO:0031012 extracellular matrix IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR001818 Pept_M10_metallopeptidase 164 324
IPR002477 Peptidoglycan-bd-like 61 113
No external refs found!