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  5. GRMZM5G862107

GRMZM5G862107


Description : ribosomal protein S1


Gene families : OG_42_0004607 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004607_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM5G862107
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
A4A49_37817 No alias 30s ribosomal protein s1, chloroplastic 0.02 Orthogroups_2024-Update
Bradi1g64130 No alias ribosomal protein S1 0.05 Orthogroups_2024-Update
Brara.F02917.1 No alias component *(bS1c) of small plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Brara.I00435.1 No alias component *(bS1c) of small plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Cre09.g394750 No alias ribosomal protein S1 0.05 Orthogroups_2024-Update
Glyma.09G031800 No alias ribosomal protein S1 0.02 Orthogroups_2024-Update
MA_694512g0010 No alias (p29344|rr1_spiol : 262.0) 30S ribosomal protein S1,... 0.02 Orthogroups_2024-Update
PSME_00004027-RA No alias (p29344|rr1_spiol : 395.0) 30S ribosomal protein S1,... 0.03 Orthogroups_2024-Update
Potri.008G101100 No alias ribosomal protein S1 0.04 Orthogroups_2024-Update
Potri.010G150300 No alias ribosomal protein S1 0.03 Orthogroups_2024-Update
Pp1s32_313V6 No alias 30s ribosomal protein s1 0.04 Orthogroups_2024-Update
Seita.9G425000.1 No alias component *(bS1c) of small plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Sobic.001G391400.1 No alias component *(bS1c) of small plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Solyc01g057830 No alias 30S ribosomal protein S1 (AHRD V3.3 *** W9RV42_9ROSA) 0.03 Orthogroups_2024-Update
Sopen01g023160 No alias S1 RNA binding domain 0.05 Orthogroups_2024-Update
evm.model.tig00000241.13 No alias (p29344|rr1_spiol : 291.0) 30S ribosomal protein S1,... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004371 glycerone kinase activity IEP Predicted GO
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006071 glycerol metabolic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0008535 respiratory chain complex IV assembly IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:0019400 alditol metabolic process IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predicted GO
BP GO:0033617 mitochondrial respiratory chain complex IV assembly IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003029 S1_domain 254 324
IPR003029 S1_domain 177 241
No external refs found!