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  5. GRMZM5G872392

GRMZM5G872392


Description : senescence-associated gene 29


Gene families : OG_42_0000052 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM5G872392
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
A4A49_06891 No alias bidirectional sugar transporter sweet12 0.03 Orthogroups_2024-Update
A4A49_13433 No alias bidirectional sugar transporter sweet9 0.02 Orthogroups_2024-Update
At3g16690 No alias Bidirectional sugar transporter SWEET... 0.03 Orthogroups_2024-Update
At5g50800 No alias Bidirectional sugar transporter SWEET... 0.04 Orthogroups_2024-Update
Bradi2g47540 No alias Nodulin MtN3 family protein 0.03 Orthogroups_2024-Update
Brara.E02655.1 No alias sugar efflux transporter *(SWEET) 0.03 Orthogroups_2024-Update
Brara.F02142.1 No alias sugar efflux transporter *(SWEET) 0.02 Orthogroups_2024-Update
Glyma.05G202700 No alias Nodulin MtN3 family protein 0.04 Orthogroups_2024-Update
Glyma.06G125800 No alias Nodulin MtN3 family protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G055960.1 No alias sugar efflux transporter *(SWEET) 0.02 Orthogroups_2024-Update
LOC_Os02g19820 No alias nodulin MtN3 family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g30910 No alias nodulin MtN3 family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g35140 No alias nodulin MtN3 family protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.002G072600 No alias Nodulin MtN3 family protein 0.03 Orthogroups_2024-Update
Sobic.004G157100.1 No alias sugar efflux transporter *(SWEET) 0.02 Orthogroups_2024-Update
Solyc03g097590 No alias Bidirectional sugar transporter SWEET (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc04g064610 No alias Bidirectional sugar transporter SWEET (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen04g026600 No alias Sugar efflux transporter for intercellular exchange 0.02 Orthogroups_2024-Update
Sopen06g028970 No alias Sugar efflux transporter for intercellular exchange 0.02 Orthogroups_2024-Update
Sopen12g024360 No alias Sugar efflux transporter for intercellular exchange 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003852 2-isopropylmalate synthase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006551 leucine metabolic process IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009098 leucine biosynthetic process IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004316 SWEET_sugar_transpr 135 219
IPR004316 SWEET_sugar_transpr 14 99
No external refs found!