GRMZM5G874163


Description : Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related


Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM5G874163
Cluster HCCA clusters: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
117217 No alias auxin response factor 6 0.03 Orthogroups_2024-Update
At1g30330 No alias Auxin response factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZTX8] 0.03 Orthogroups_2024-Update
At2g28350 No alias Auxin response factor (Fragment)... 0.03 Orthogroups_2024-Update
Bradi3g28950 No alias auxin response factor 16 0.03 Orthogroups_2024-Update
Bradi5g10950 No alias auxin response factor 1 0.03 Orthogroups_2024-Update
Bradi5g25767 No alias auxin response factor 6 0.02 Orthogroups_2024-Update
Brara.A01401.1 No alias ARF-type transcription factor 0.04 Orthogroups_2024-Update
Brara.A02353.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E00126.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G169820 No alias Transcriptional factor B3 family protein /... 0.02 Orthogroups_2024-Update
Glyma.05G200800 No alias auxin response factor 2 0.04 Orthogroups_2024-Update
Glyma.06G164900 No alias auxin response factor 2 0.03 Orthogroups_2024-Update
Glyma.10G210600 No alias auxin response factor 16 0.03 Orthogroups_2024-Update
Glyma.11G145500 No alias auxin response factor 10 0.03 Orthogroups_2024-Update
Glyma.12G164100 No alias auxin response factor 1 0.03 Orthogroups_2024-Update
Glyma.14G032700 No alias auxin response factor 6 0.04 Orthogroups_2024-Update
HORVU3Hr1G072340.1 No alias ARF-type transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G096510.5 No alias ARF-type transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G054640.1 No alias ARF-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os11g32110 No alias auxin response factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g29520 No alias auxin response factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_40335g0010 No alias (at5g62000 : 752.0) Encodes an auxin response factor.... 0.02 Orthogroups_2024-Update
PSME_00020341-RA No alias (at1g19220 : 630.0) Encodes an auxin response factor... 0.03 Orthogroups_2024-Update
Potri.004G078200 No alias auxin response factor 8 0.03 Orthogroups_2024-Update
Potri.005G207700 No alias auxin response factor 8 0.02 Orthogroups_2024-Update
Potri.011G091900 No alias auxin response factor 6 0.03 Orthogroups_2024-Update
Potri.015G105300 No alias auxin response factor 2 0.04 Orthogroups_2024-Update
Pp1s280_7V6 No alias arf1-binding protein 0.03 Orthogroups_2024-Update
Seita.7G108100.1 No alias ARF-type transcription factor 0.05 Orthogroups_2024-Update
Seita.8G135700.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G003800.1 No alias ARF-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G231800.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G073600.1 No alias ARF-type transcription factor & auxin signal mediator... 0.01 Orthogroups_2024-Update
Solyc01g096070 No alias Auxin Response Factor 18 0.02 Orthogroups_2024-Update
Solyc05g047460 No alias Auxin Response Factor 7B 0.02 Orthogroups_2024-Update
Sopen00g003680 No alias Auxin response factor 0.03 Orthogroups_2024-Update
Sopen03g005820 No alias Auxin response factor 0.02 Orthogroups_2024-Update
Sopen07g021880 No alias Auxin response factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
BP GO:0009725 response to hormone IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010525 Auxin_resp 255 334
IPR003340 B3_DNA-bd 128 229
No external refs found!