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GRMZM5G878561


Description : Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM5G878561
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
At1g69170 No alias Squamosa promoter-binding-like protein 6... 0.04 Orthogroups_2024-Update
Brara.A03153.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G01764.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Cre01.g012200 No alias squamosa promoter-binding protein-like 12 0.01 Orthogroups_2024-Update
Cre07.g335150 No alias squamosa promoter binding protein-like 4 0.01 Orthogroups_2024-Update
Glyma.01G063700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Glyma.03G117500 No alias squamosa promoter binding protein-like 8 0.04 Orthogroups_2024-Update
Glyma.12G162999 No alias squamosa promoter-binding protein-like 12 0.03 Orthogroups_2024-Update
Glyma.17G080700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.04 Orthogroups_2024-Update
HORVU5Hr1G073440.13 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G076380.9 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os04g46580 No alias OsSPL7 - SBP-box gene family member, expressed 0.02 Orthogroups_2024-Update
MA_47367g0010 No alias (at1g02065 : 173.0) Encodes an SBP-box gene, a member of... 0.03 Orthogroups_2024-Update
PSME_00036287-RA No alias (at1g02065 : 120.0) Encodes an SBP-box gene, a member of... 0.03 Orthogroups_2024-Update
PSME_00047223-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00051919-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00053503-RA No alias (at1g02065 : 156.0) Encodes an SBP-box gene, a member of... 0.02 Orthogroups_2024-Update
Potri.001G398200 No alias squamosa promoter binding protein-like 5 0.03 Orthogroups_2024-Update
Potri.012G100700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Potri.018G149900 No alias squamosa promoter binding protein-like 2 0.02 Orthogroups_2024-Update
Seita.1G069300.1 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
Solyc07g053810 No alias Squamosa promoter binding protein 4 0.03 Orthogroups_2024-Update
Solyc10g078700 No alias Squamosa promoter binding protein 15 0.03 Orthogroups_2024-Update
Sopen07g027780 No alias SBP domain 0.02 Orthogroups_2024-Update
Sopen07g031170 No alias SBP domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 168 195
IPR004333 SBP_dom 84 133
No external refs found!