Description : RING-H2 finger protein ATL54 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFY8]
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At1g72220 | |
Cluster | HCCA clusters: Cluster_229 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_29197 | No alias | ring-h2 finger protein atl73 | 0.03 | Orthogroups_2024-Update | |
A4A49_31261 | No alias | ring-h2 finger protein atl70 | 0.04 | Orthogroups_2024-Update | |
A4A49_37314 | No alias | e3 ubiquitin-protein ligase atl9 | 0.02 | Orthogroups_2024-Update | |
Brara.A03446.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Brara.B00209.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Brara.E00282.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.F00390.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.H01648.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.H02311.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
GRMZM2G340444 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.06G284600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.09G140800 | No alias | carbon/nitrogen insensitive 1 | 0.03 | Orthogroups_2024-Update | |
Glyma.09G214600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.10G156500 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.11G242500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G108500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G028260.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G081150.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU4Hr1G025400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g11480 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os06g11450 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.04 | Orthogroups_2024-Update | |
MA_10436208g0010 | No alias | (at1g72200 : 100.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
MA_5319g0010 | No alias | (at1g49230 : 120.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
Mp3g00390.1 | No alias | RING-H2-class E3 ligase | 0.02 | Orthogroups_2024-Update | |
PSME_00003023-RA | No alias | (at1g72200 : 141.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
Potri.010G010500 | No alias | TOXICOS EN LEVADURA 2 | 0.03 | Orthogroups_2024-Update | |
Potri.010G206300 | No alias | TOXICOS EN LEVADURA 2 | 0.05 | Orthogroups_2024-Update | |
Potri.010G243500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Seita.1G197600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Seita.2G238400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Seita.3G374600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Seita.5G368500.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.004G187800.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.009G168900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Solyc01g096650 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT5G07040.1) | 0.03 | Orthogroups_2024-Update | |
Solyc11g006450 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) | 0.02 | Orthogroups_2024-Update | |
Solyc12g087840 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
Sopen01g002900 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_2102.17 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEP | Predicted GO |
MF | GO:0004126 | cytidine deaminase activity | IEP | Predicted GO |
MF | GO:0004506 | squalene monooxygenase activity | IEP | Predicted GO |
MF | GO:0005375 | copper ion transmembrane transporter activity | IEP | Predicted GO |
CC | GO:0005811 | lipid droplet | IEP | Predicted GO |
BP | GO:0006213 | pyrimidine nucleoside metabolic process | IEP | Predicted GO |
BP | GO:0006216 | cytidine catabolic process | IEP | Predicted GO |
BP | GO:0006825 | copper ion transport | IEP | Predicted GO |
BP | GO:0009119 | ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0009164 | nucleoside catabolic process | IEP | Predicted GO |
BP | GO:0009719 | response to endogenous stimulus | IEP | Predicted GO |
BP | GO:0009725 | response to hormone | IEP | Predicted GO |
BP | GO:0009972 | cytidine deamination | IEP | Predicted GO |
BP | GO:0010033 | response to organic substance | IEP | Predicted GO |
CC | GO:0012511 | monolayer-surrounded lipid storage body | IEP | Predicted GO |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015693 | magnesium ion transport | IEP | Predicted GO |
CC | GO:0016021 | integral component of membrane | IEP | Predicted GO |
BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Predicted GO |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predicted GO |
MF | GO:0019239 | deaminase activity | IEP | Predicted GO |
BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0030001 | metal ion transport | IEP | Predicted GO |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Predicted GO |
CC | GO:0031224 | intrinsic component of membrane | IEP | Predicted GO |
BP | GO:0034656 | nucleobase-containing small molecule catabolic process | IEP | Predicted GO |
BP | GO:0035434 | copper ion transmembrane transport | IEP | Predicted GO |
BP | GO:0042221 | response to chemical | IEP | Predicted GO |
BP | GO:0042454 | ribonucleoside catabolic process | IEP | Predicted GO |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
CC | GO:0044425 | membrane part | IEP | Predicted GO |
BP | GO:0046087 | cytidine metabolic process | IEP | Predicted GO |
BP | GO:0046131 | pyrimidine ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0046133 | pyrimidine ribonucleoside catabolic process | IEP | Predicted GO |
BP | GO:0046135 | pyrimidine nucleoside catabolic process | IEP | Predicted GO |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0051259 | protein complex oligomerization | IEP | Predicted GO |
BP | GO:0051260 | protein homooligomerization | IEP | Predicted GO |
BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0070838 | divalent metal ion transport | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
BP | GO:0072511 | divalent inorganic cation transport | IEP | Predicted GO |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072529 | pyrimidine-containing compound catabolic process | IEP | Predicted GO |
BP | GO:1901658 | glycosyl compound catabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 176 | 219 |
No external refs found! |