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At1g72370


Description : 40S ribosomal protein SA [Source:UniProtKB/TrEMBL;Acc:A0A178WNA1]


Gene families : OG_42_0001668 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g72370
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
36118 No alias 40s ribosomal protein SA 0.03 Orthogroups_2024-Update
Bradi1g72480 No alias 40s ribosomal protein SA B 0.03 Orthogroups_2024-Update
Brara.G03124.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Cre10.g432800 No alias 40s ribosomal protein SA B 0.02 Orthogroups_2024-Update
GRMZM2G159237 No alias 40s ribosomal protein SA B 0.04 Orthogroups_2024-Update
HORVU2Hr1G030880.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
LOC_Os03g08440 No alias ribosomal protein S2, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G164000 No alias 40s ribosomal protein SA 0.03 Orthogroups_2024-Update
Potri.003G071200 No alias 40s ribosomal protein SA B 0.03 Orthogroups_2024-Update
Potri.012G117600 No alias 40s ribosomal protein SA B 0.03 Orthogroups_2024-Update
Seita.2G389700.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.002G374900.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.002G375100.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Solyc06g072120 No alias 40S ribosomal protein SA (AHRD V3.3 *** K4C8T4_SOLLC) 0.03 Orthogroups_2024-Update
Sopen03g029850 No alias Ribosomal protein S2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004820 glycine-tRNA ligase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006426 glycyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 23 117
IPR001865 Ribosomal_S2 121 186
No external refs found!