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  5. At1g72970

At1g72970


Description : HTH [Source:UniProtKB/TrEMBL;Acc:A0A178WG21]


Gene families : OG_42_0000273 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g72970
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
429523 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
At5g51930 No alias Glucose-methanol-choline (GMC) oxidoreductase family... 0.03 Orthogroups_2024-Update
Bradi5g18890 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Orthogroups_2024-Update
Brara.I03850.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.05G050100 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
Glyma.13G350300 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
Kfl00395_0030 kfl00395_0030_v1.1 (at1g12570 : 217.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
LOC_Os08g31030 No alias HOTHEAD precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g19930 No alias HOTHEAD precursor, putative, expressed 0.05 Orthogroups_2024-Update
MA_762g0010 No alias (at1g14190 : 327.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
MA_9196249g0010 No alias (at1g72970 : 113.0) Originally identified as a mutation... 0.03 Orthogroups_2024-Update
PSME_00032105-RA No alias (at1g14190 : 453.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00032973-RA No alias (at1g12570 : 369.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00048296-RA No alias (at1g14190 : 439.0) Glucose-methanol-choline (GMC)... 0.04 Orthogroups_2024-Update
Potri.001G111500 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.06 Orthogroups_2024-Update
Potri.010G168100 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Orthogroups_2024-Update
Pp1s78_69V6 No alias unnamed protein product [Vitis vinifera] 0.02 Orthogroups_2024-Update
Seita.2G186600.1 No alias omega-hydroxy fatty acyl dehydrogenase *(HOTHEAD) 0.04 Orthogroups_2024-Update
Solyc08g080190 No alias Glucose-methanol-choline (GMC) oxidoreductase family... 0.05 Orthogroups_2024-Update
Sopen06g022090 No alias GMC oxidoreductase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004668 protein-arginine deiminase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009445 putrescine metabolic process IEP Predicted GO
BP GO:0009446 putrescine biosynthetic process IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 63 335
IPR007867 GMC_OxRtase_C 431 577
No external refs found!