Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Gene families : OG_42_0000879 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000879_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Zea release: GRMZM5G897976 | |
Cluster | HCCA clusters: Cluster_73 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g18600 | No alias | DEAD-box ATP-dependent RNA helicase 51... | 0.06 | Orthogroups_2024-Update | |
At5g54910 | No alias | DEAD-box ATP-dependent RNA helicase 32... | 0.06 | Orthogroups_2024-Update | |
Brara.E00183.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Brara.E02336.1 | No alias | regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway | 0.05 | Orthogroups_2024-Update | |
Brara.F02458.1 | No alias | regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway | 0.03 | Orthogroups_2024-Update | |
Brara.J00951.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Cre03.g156150 | No alias | DEA(D/H)-box RNA helicase family protein | 0.03 | Orthogroups_2024-Update | |
Cre07.g314900 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.02 | Orthogroups_2024-Update | |
Glyma.04G145400 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.04 | Orthogroups_2024-Update | |
Glyma.06G209400 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.04 | Orthogroups_2024-Update | |
HORVU1Hr1G004510.5 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Kfl00020_0660 | kfl00020_0660_v1.... | (at2g40700 : 447.0) P-loop containing nucleoside... | 0.01 | Orthogroups_2024-Update | |
Kfl00630_0030 | kfl00630_0030_v1.... | (at3g18600 : 568.0) P-loop containing nucleoside... | 0.03 | Orthogroups_2024-Update | |
PSME_00013759-RA | No alias | (at3g18600 : 554.0) P-loop containing nucleoside... | 0.02 | Orthogroups_2024-Update | |
Potri.001G250700 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.04 | Orthogroups_2024-Update | |
Potri.001G423300 | No alias | DEA(D/H)-box RNA helicase family protein | 0.03 | Orthogroups_2024-Update | |
Potri.009G045300 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.04 | Orthogroups_2024-Update | |
Pp1s358_58V6 | No alias | atp-dependent rna helicase | 0.02 | Orthogroups_2024-Update | |
Pp1s59_317V6 | No alias | rna helicase | 0.04 | Orthogroups_2024-Update | |
Seita.2G332500.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Sobic.001G051500.1 | No alias | regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway | 0.06 | Orthogroups_2024-Update | |
Sobic.002G318800.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
Solyc03g114370 | No alias | RNA helicase DEAD13 | 0.05 | Orthogroups_2024-Update | |
Solyc07g064520 | No alias | RNA helicase DEAD24 | 0.03 | Orthogroups_2024-Update | |
Sopen03g033470 | No alias | DEAD/DEAH box helicase | 0.03 | Orthogroups_2024-Update | |
Sopen07g021900 | No alias | DEAD/DEAH box helicase | 0.02 | Orthogroups_2024-Update | |
Sopen07g032720 | No alias | DEAD/DEAH box helicase | 0.03 | Orthogroups_2024-Update | |
evm.model.tig00000441.11 | No alias | (at3g18600 : 300.0) P-loop containing nucleoside... | 0.02 | Orthogroups_2024-Update | |
evm.model.tig00000441.12 | No alias | (at5g65900 : 171.0) DEA(D/H)-box RNA helicase family... | 0.03 | Orthogroups_2024-Update | |
evm.model.tig00020604.24 | No alias | (at5g54910 : 437.0) DEA(D/H)-box RNA helicase family... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
MF | GO:0004018 | N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | IEP | Predicted GO |
BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
BP | GO:0009314 | response to radiation | IEP | Predicted GO |
BP | GO:0009416 | response to light stimulus | IEP | Predicted GO |
BP | GO:0009581 | detection of external stimulus | IEP | Predicted GO |
BP | GO:0009582 | detection of abiotic stimulus | IEP | Predicted GO |
BP | GO:0009583 | detection of light stimulus | IEP | Predicted GO |
BP | GO:0009584 | detection of visible light | IEP | Predicted GO |
BP | GO:0009605 | response to external stimulus | IEP | Predicted GO |
BP | GO:0009628 | response to abiotic stimulus | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016842 | amidine-lyase activity | IEP | Predicted GO |
BP | GO:0018298 | protein-chromophore linkage | IEP | Predicted GO |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Predicted GO |
MF | GO:0035299 | inositol pentakisphosphate 2-kinase activity | IEP | Predicted GO |
BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
BP | GO:0051606 | detection of stimulus | IEP | Predicted GO |
MF | GO:0097747 | RNA polymerase activity | IEP | Predicted GO |
No external refs found! |