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  5. Brara.A00055.1

Brara.A00055.1


Description : Unknown function


Gene families : OG_42_0000920 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000920_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00055.1
Cluster HCAA Clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
At1g19930 No alias Putative F-box/kelch-repeat protein At1g19930... 0.05 Orthogroups_2024-Update
At2g20380 No alias F-box protein At2g20380 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK64] 0.03 Orthogroups_2024-Update
At3g08810 No alias F-box/kelch-repeat protein At3g08810... 0.04 Orthogroups_2024-Update
At4g11750 No alias Putative F-box/kelch-repeat protein At4g11750... 0.03 Orthogroups_2024-Update
At4g11770 No alias Putative F-box/kelch-repeat protein At4g11770... 0.04 Orthogroups_2024-Update
At4g25710 No alias F-box/kelch-repeat protein At4g25710... 0.04 Orthogroups_2024-Update
At4g29370 No alias F-box/kelch-repeat protein At4g29370... 0.03 Orthogroups_2024-Update
At5g03000 No alias Putative F-box/kelch-repeat protein At5g03000... 0.03 Orthogroups_2024-Update
At5g03010 No alias At5g03010 [Source:UniProtKB/TrEMBL;Acc:Q6NLS9] 0.05 Orthogroups_2024-Update
At5g03020 No alias F-box/kelch-repeat protein At5g03020... 0.03 Orthogroups_2024-Update
At5g49000 No alias F-box/kelch-repeat protein At5g49000... 0.04 Orthogroups_2024-Update
At5g51250 No alias F-box/kelch-repeat protein At5g51250... 0.03 Orthogroups_2024-Update
Brara.B01596.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H02153.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I01852.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.K00892.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 11 51
IPR006652 Kelch_1 114 160
IPR006652 Kelch_1 168 204
No external refs found!