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  5. Brara.A00056.1

Brara.A00056.1


Description : Unknown function


Gene families : OG_42_0000920 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000920_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00056.1
Cluster HCAA Clusters: Cluster_395

Target Alias Description ECC score Gene Family Method Actions
At2g20380 No alias F-box protein At2g20380 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK64] 0.03 Orthogroups_2024-Update
At4g29370 No alias F-box/kelch-repeat protein At4g29370... 0.03 Orthogroups_2024-Update
At5g02980 No alias Putative F-box/kelch-repeat protein At5g02980... 0.03 Orthogroups_2024-Update
At5g02990 No alias Galactose oxidase/kelch repeat superfamily protein... 0.03 Orthogroups_2024-Update
Brara.J02767.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.K00893.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR006652 Kelch_1 160 197
IPR006652 Kelch_1 118 156
IPR001810 F-box_dom 12 50
No external refs found!