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Description : histone *(H3)
Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.A00091.1 | |
| Cluster | HCAA Clusters: Cluster_155 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| HORVU4Hr1G067970.1 | No alias | histone *(H3) | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G021840.15 | No alias | histone *(H3) | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G033030.1 | No alias | histone *(H3) | 0.03 | Orthogroups_2024-Update | |
| evm.model.tig00001007.15 | No alias | (at5g10980 : 155.0) Histone superfamily protein;... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Predicted GO |
| MF | GO:0004525 | ribonuclease III activity | IEP | Predicted GO |
| MF | GO:0004860 | protein kinase inhibitor activity | IEP | Predicted GO |
| MF | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity | IEP | Predicted GO |
| CC | GO:0005886 | plasma membrane | IEP | Predicted GO |
| BP | GO:0006541 | glutamine metabolic process | IEP | Predicted GO |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Predicted GO |
| BP | GO:0007030 | Golgi organization | IEP | Predicted GO |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
| MF | GO:0016211 | ammonia ligase activity | IEP | Predicted GO |
| MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Predicted GO |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Predicted GO |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Predicted GO |
| MF | GO:0019210 | kinase inhibitor activity | IEP | Predicted GO |
| MF | GO:0030291 | protein serine/threonine kinase inhibitor activity | IEP | Predicted GO |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predicted GO |
| CC | GO:0043190 | ATP-binding cassette (ABC) transporter complex | IEP | Predicted GO |
| CC | GO:0072546 | ER membrane protein complex | IEP | Predicted GO |
| CC | GO:0098533 | ATPase dependent transmembrane transport complex | IEP | Predicted GO |
| CC | GO:1902495 | transmembrane transporter complex | IEP | Predicted GO |
| CC | GO:1904949 | ATPase complex | IEP | Predicted GO |
| CC | GO:1990351 | transporter complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007125 | Histone_H2A/H2B/H3 | 1 | 132 |
| No external refs found! |