1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.A00190.1

Brara.A00190.1


Description : catalytic component *(IDS11) of geranyl diphosphate synthase complex & isoprenyl diphosphate synthase *(IDS) & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group


Gene families : OG_42_0001166 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001166_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00190.1
Cluster HCAA Clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
231100 No alias geranylgeranyl pyrophosphate synthase 1 0.03 Orthogroups_2024-Update
Solyc11g011240 No alias geranylgeranyl pyrophosphate synthase 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 96 332
No external refs found!