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  5. Brara.A00235.1

Brara.A00235.1


Description : NAC-type transcription factor


Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00235.1
Cluster HCAA Clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
A4A49_20604 No alias nac domain-containing protein 43 0.04 Orthogroups_2024-Update
A4A49_25578 No alias nac domain-containing protein 7 0.04 Orthogroups_2024-Update
Brara.C00813.1 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
Brara.D01471.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G01268.1 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I02350.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.17G154100 No alias NAC domain containing protein 71 0.03 Orthogroups_2024-Update
LOC_Os06g01230 No alias no apical meristem protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g33940 No alias NAC domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g02300 No alias no apical meristem protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g42130 No alias no apical meristem protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00053123-RA No alias (at5g53950 : 278.0) Transcriptional activator of the NAC... 0.02 Orthogroups_2024-Update
Potri.001G396300 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Orthogroups_2024-Update
Potri.005G058900 No alias NAC domain containing protein 82 0.03 Orthogroups_2024-Update
Potri.012G007500 No alias NAC domain containing protein 62 0.03 Orthogroups_2024-Update
Solyc07g062840 No alias goblet 0.03 Orthogroups_2024-Update
Sopen07g031040 No alias No apical meristem (NAM) protein 0.03 Orthogroups_2024-Update
Sopen08g022950 No alias No apical meristem (NAM) protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0030014 CCR4-NOT complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003441 NAC-dom 11 138
No external refs found!