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  5. Brara.A00236.1

Brara.A00236.1


Description : Unknown function


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00236.1
Cluster HCAA Clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
A4A49_16283 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
A4A49_18484 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
A4A49_33079 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
A4A49_34609 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
At1g56510 No alias Disease resistance protein ADR2... 0.03 Orthogroups_2024-Update
At1g72900 No alias Similar to part of disease resistance protein... 0.03 Orthogroups_2024-Update
At4g16860 No alias Disease resistance protein RPP4... 0.06 Orthogroups_2024-Update
At4g16950 No alias Disease resistance protein RPP5... 0.04 Orthogroups_2024-Update
At5g40100 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At5g48780 No alias Disease resistance protein (TIR-NBS class)... 0.03 Orthogroups_2024-Update
Brara.I01382.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Glyma.01G112300 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.02G076900 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.03G087600 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.06G275000 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Glyma.06G310000 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.07G067900 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.10G184300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.12G132200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.12G240100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.16G085700 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G086700 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Glyma.16G135200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.16G135500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G137600 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G159100 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G215300 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Glyma.16G215400 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.19G054900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
PSME_00008085-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00024230-RA No alias (at1g27170 : 392.0) transmembrane receptors;ATP binding;... 0.03 Orthogroups_2024-Update
PSME_00043800-RA No alias (at5g36930 : 119.0) Disease resistance protein... 0.02 Orthogroups_2024-Update
Potri.005G003900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.005G004200 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.03 Orthogroups_2024-Update
Potri.011G013201 No alias transmembrane receptors;ATP binding 0.04 Orthogroups_2024-Update
Potri.011G013401 No alias transmembrane receptors;ATP binding 0.02 Orthogroups_2024-Update
Potri.017G103800 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.T001700 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.T002066 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.T004501 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.T077100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Solyc11g062150 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
Sopen12g032720 No alias Phloem protein 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA 16Dec
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 226 394
IPR000157 TIR_dom 15 74
IPR011713 Leu-rich_rpt_3 567 586
No external refs found!