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  5. Brara.A00239.1

Brara.A00239.1


Description : microtubule assembly factor *(TCS1)


Gene families : OG_42_0001150 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001150_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00239.1
Cluster HCAA Clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
A4A49_07733 No alias filament-like plant protein 6 0.04 Orthogroups_2024-Update
A4A49_14400 No alias filament-like plant protein 4 0.03 Orthogroups_2024-Update
Bradi1g68460 No alias Plant protein of unknown function (DUF869) 0.04 Orthogroups_2024-Update
PSME_00006002-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00032689-RA No alias (at1g47900 : 204.0) FUNCTIONS IN: molecular_function... 0.03 Orthogroups_2024-Update
Pp1s101_108V6 No alias F6F9.12; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s187_93V6 No alias F6F9.12; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s49_212V6 No alias F6F9.12; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
InterPro domains Description Start Stop
IPR008587 FPP_plant 88 539
IPR008587 FPP_plant 528 724
No external refs found!