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  5. Brara.A00260.1

Brara.A00260.1


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000975 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.A00260.1
Cluster HCAA Clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Bradi3g42280 No alias NEP-interacting protein 2 0.03 Orthogroups_2024-Update
Brara.F02569.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G00246.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.K01342.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
GRMZM2G068239 No alias NEP-interacting protein 2 0.02 Orthogroups_2024-Update
Glyma.08G316400 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.17G101800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G108200 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Sobic.007G175900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc02g083400 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061DF87_THECC) 0.03 Orthogroups_2024-Update
Solyc03g033330 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061DF87_THECC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR027367 Gly-zipper_YMGG 51 86
IPR001841 Znf_RING 190 234
No external refs found!