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  5. Brara.A00278.1

Brara.A00278.1


Description : RKD-type transcription factor & germ cell differentiation factor *(RKD)


Gene families : OG_42_0000310 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00278.1
Cluster HCAA Clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
At1g74480 No alias Protein RKD2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA66] 0.02 Orthogroups_2024-Update
Cre06.g297150 No alias RWP-RK domain-containing protein 0.02 Orthogroups_2024-Update
Cre14.g612100 No alias RWP-RK domain-containing protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G075870.2 No alias germ cell differentiation factor *(RKD) & RKD-type... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 198 245
No external refs found!