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  5. Brara.A00302.1

Brara.A00302.1


Description : ligand-gated cation channel *(GLR)


Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00302.1
Cluster HCAA Clusters: Cluster_304

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G308400 No alias glutamate receptor 3.4 0.04 Orthogroups_2024-Update
HORVU2Hr1G064530.8 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
LOC_Os09g25990 No alias glutamate receptor, putative, expressed 0.02 Orthogroups_2024-Update
MA_103602g0010 No alias (at1g42540 : 176.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
MA_10432703g0020 No alias (q7xp59|glr31_orysa : 244.0) Glutamate receptor 3.1... 0.03 Orthogroups_2024-Update
PSME_00009649-RA No alias (at4g35290 : 475.0) Encodes a putative glutamate... 0.03 Orthogroups_2024-Update
Potri.006G268400 No alias glutamate receptor 2.8 0.03 Orthogroups_2024-Update
Sopen06g022640 No alias Receptor family ligand binding region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0045048 protein insertion into ER membrane IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 808 842
IPR001828 ANF_lig-bd_rcpt 50 408
IPR001638 Solute-binding_3/MltF_N 487 807
No external refs found!