1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.A00305.1

Brara.A00305.1


Description : transcription factor *(NIN) & NLP-type transcription factor


Gene families : OG_42_0000432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00305.1
Cluster HCAA Clusters: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
118918 No alias Plant regulator RWP-RK family protein 0.03 Orthogroups_2024-Update
A4A49_01841 No alias protein nlp4 0.03 Orthogroups_2024-Update
Bradi4g37147 No alias Plant regulator RWP-RK family protein 0.02 Orthogroups_2024-Update
Brara.F01471.1 No alias NLP-type transcription factor & transcription factor *(NIN) 0.03 Orthogroups_2024-Update
GRMZM2G048582 No alias Plant regulator RWP-RK family protein 0.04 Orthogroups_2024-Update
Glyma.04G017400 No alias Plant regulator RWP-RK family protein 0.03 Orthogroups_2024-Update
Glyma.09G137000 No alias NIN like protein 7 0.04 Orthogroups_2024-Update
Glyma.20G160200 No alias NIN like protein 7 0.04 Orthogroups_2024-Update
LOC_Os11g40110 No alias RWP-RK, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s128_79V6 No alias T19F6.10; RWP-RK domain-containing protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.5G004100.1 No alias NLP-type transcription factor & nitrate response... 0.03 Orthogroups_2024-Update
Seita.6G248300.1 No alias NLP-type transcription factor & transcription factor *(NIN) 0.04 Orthogroups_2024-Update
Seita.8G074000.1 No alias NLP-type transcription factor & transcription factor *(NIN) 0.04 Orthogroups_2024-Update
Sobic.003G003600.1 No alias NLP-type transcription factor & nitrate response... 0.05 Orthogroups_2024-Update
Solyc08g008410 No alias Plant regulator RWP-RK family protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 645 692
IPR000270 PB1_dom 863 945
No external refs found!