Description : Unknown function
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.A00314.1 | |
Cluster | HCAA Clusters: Cluster_87 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
105729 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
76175 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
83034 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
At1g13410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein... | 0.04 | Orthogroups_2024-Update | |
At3g46790 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | Orthogroups_2024-Update | |
Bradi1g72290 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Bradi2g04723 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi2g09441 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi4g20810 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.05G240300 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.08G117400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.08G141600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
Glyma.15G273200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
HORVU4Hr1G032070.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
HORVU4Hr1G064880.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
HORVU5Hr1G047290.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
MA_724726g0010 | No alias | (at1g11290 : 611.0) Pentatricopeptide Repeat Protein... | 0.06 | Orthogroups_2024-Update | |
PSME_00001133-RA | No alias | (at2g03880 : 550.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00003567-RA | No alias | (at4g13650 : 593.0) Pentatricopeptide repeat (PPR)... | 0.04 | Orthogroups_2024-Update | |
PSME_00013280-RA | No alias | (at4g33170 : 410.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00048766-RA | No alias | (at4g02750 : 577.0) Tetratricopeptide repeat (TPR)-like... | 0.05 | Orthogroups_2024-Update | |
PSME_00056153-RA | No alias | (at2g13600 : 519.0) Pentatricopeptide repeat (PPR)... | 0.05 | Orthogroups_2024-Update | |
Potri.010G161800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.016G053500 | No alias | mitochondrial RNAediting factor 1 | 0.02 | Orthogroups_2024-Update | |
Seita.1G077500.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.1G205700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.1G215700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.1G290500.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.2G001800.1 | No alias | RNA editing factor *(ELI1) | 0.02 | Orthogroups_2024-Update | |
Seita.4G225800.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.5G124400.1 | No alias | RNA editing factor *(OTP81) | 0.03 | Orthogroups_2024-Update | |
Seita.8G017200.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.9G213100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.002G403500.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.003G030100.1 | No alias | RNA editing factor *(CWM1) | 0.03 | Orthogroups_2024-Update | |
Sobic.010G097700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sopen10g004380 | No alias | PPR repeat | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predicted GO |
MF | GO:0004725 | protein tyrosine phosphatase activity | IEP | Predicted GO |
MF | GO:0004749 | ribose phosphate diphosphokinase activity | IEP | Predicted GO |
BP | GO:0006470 | protein dephosphorylation | IEP | Predicted GO |
BP | GO:0009605 | response to external stimulus | IEP | Predicted GO |
BP | GO:0009606 | tropism | IEP | Predicted GO |
BP | GO:0010274 | hydrotropism | IEP | Predicted GO |
BP | GO:0016311 | dephosphorylation | IEP | Predicted GO |
MF | GO:0016778 | diphosphotransferase activity | IEP | Predicted GO |
MF | GO:0016791 | phosphatase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 735 | 806 |
IPR002885 | Pentatricopeptide_repeat | 90 | 135 |
IPR002885 | Pentatricopeptide_repeat | 389 | 414 |
IPR002885 | Pentatricopeptide_repeat | 193 | 223 |
IPR002885 | Pentatricopeptide_repeat | 294 | 322 |
IPR002885 | Pentatricopeptide_repeat | 466 | 489 |
IPR002885 | Pentatricopeptide_repeat | 70 | 89 |
IPR002885 | Pentatricopeptide_repeat | 532 | 559 |
IPR002885 | Pentatricopeptide_repeat | 163 | 192 |
IPR002885 | Pentatricopeptide_repeat | 361 | 387 |
IPR002885 | Pentatricopeptide_repeat | 495 | 521 |
No external refs found! |