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  5. Brara.A00321.1

Brara.A00321.1


Description : Unknown function


Gene families : OG_42_0000224 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00321.1
Cluster HCAA Clusters: Cluster_357

Target Alias Description ECC score Gene Family Method Actions
Bradi3g02860 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
GRMZM2G039725 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
GRMZM2G314712 No alias Function unknown 0.04 Orthogroups_2024-Update
LOC_Os04g33030 No alias protein binding protein, putative, expressed 0.03 Orthogroups_2024-Update
Sopen08g003070 No alias Zinc finger, C3HC4 type (RING finger) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!