Brara.A00355.1

Description : transcription factor *(A/B-GATA)

Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.A00355.1
Cluster	HCAA Clusters: Cluster_262

Target	Alias	Description	ECC score	Gene Family Method
A4A49_15410	No alias	gata transcription factor 12	0.03	Orthogroups_2024-Update
A4A49_32464	No alias	gata transcription factor 18	0.03	Orthogroups_2024-Update
A4A49_39670	No alias	gata transcription factor 11	0.03	Orthogroups_2024-Update
At2g45050	No alias	GATA transcription factor 2...	0.04	Orthogroups_2024-Update
At4g26150	No alias	Putative GATA transcription factor 22...	0.03	Orthogroups_2024-Update
At5g25830	No alias	GATA transcription factor 12...	0.05	Orthogroups_2024-Update
Brara.A00207.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Brara.F02763.1	No alias	transcription factor *(A/B-GATA)	0.05	Orthogroups_2024-Update
Cre08.g358532	No alias	GATA transcription factor 9	0.02	Orthogroups_2024-Update
Glyma.02G056600	No alias	GATA type zinc finger transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.02G073900	No alias	GATA transcription factor 4	0.06	Orthogroups_2024-Update
Glyma.03G232900	No alias	GATA transcription factor 16	0.04	Orthogroups_2024-Update
Glyma.04G051300	No alias	cytokinin-responsive gata factor 1	0.04	Orthogroups_2024-Update
Glyma.11G068700	No alias	GATA type zinc finger transcription factor family protein	0.07	Orthogroups_2024-Update
Glyma.17G192800	No alias	GATA transcription factor 12	0.04	Orthogroups_2024-Update
Potri.001G188500	No alias	GATA transcription factor 9	0.03	Orthogroups_2024-Update
Potri.003G174800	No alias	GATA transcription factor 1	0.03	Orthogroups_2024-Update
Potri.004G161500	No alias	GATA transcription factor 5	0.03	Orthogroups_2024-Update
Potri.010G001300	No alias	GATA transcription factor 15	0.03	Orthogroups_2024-Update
Pp1s241_14V6	No alias	hypothetical protein similar to Arabidopsis thaliana...	0.02	Orthogroups_2024-Update
Seita.5G470400.1	No alias	transcription factor *(A/B-GATA)	0.04	Orthogroups_2024-Update
Seita.7G267900.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Sobic.008G179800.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Solyc03g120890	No alias	GATA transcription factor (AHRD V3.3 *** K4BMN8_SOLLC)	0.03	Orthogroups_2024-Update
Solyc09g075610	No alias	GATA transcription factor, putative (AHRD V3.3 *** B9RNI7_RICCO)	0.03	Orthogroups_2024-Update
Sopen01g026800	No alias	GATA zinc finger	0.02	Orthogroups_2024-Update
Sopen01g036490	No alias	GATA zinc finger	0.02	Orthogroups_2024-Update
Sopen05g034530	No alias	GATA zinc finger	0.03	Orthogroups_2024-Update
Sopen09g034220	No alias	GATA zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Predicted GO
MF	GO:0030414	peptidase inhibitor activity	IEP	Predicted GO
MF	GO:0061134	peptidase regulator activity	IEP	Predicted GO
MF	GO:0061135	endopeptidase regulator activity	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	177	210

External Links

No external refs found!

Brara.A00355.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation