1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.A00456.1

Brara.A00456.1


Description : MYB class-R2R3 subgroup-21 transcription factor


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00456.1
Cluster HCAA Clusters: Cluster_402

Target Alias Description ECC score Gene Family Method Actions
A4A49_10535 No alias myb-related protein 3r-1 0.03 Orthogroups_2024-Update
A4A49_38114 No alias transcription factor myb44 0.03 Orthogroups_2024-Update
At1g73410 No alias MYB54 [Source:UniProtKB/TrEMBL;Acc:A0A178WGB1] 0.04 Orthogroups_2024-Update
Brara.A00985.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.I03324.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.04 Orthogroups_2024-Update
Brara.I04806.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.03 Orthogroups_2024-Update
Brara.K00427.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
GRMZM5G803308 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Glyma.02G225700 No alias myb domain protein 119 0.04 Orthogroups_2024-Update
Glyma.04G184200 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Glyma.14G192600 No alias myb domain protein 64 0.03 Orthogroups_2024-Update
Glyma.16G072700 No alias myb domain protein 98 0.05 Orthogroups_2024-Update
Glyma.19G062000 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
HORVU4Hr1G077230.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G049880.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.04 Orthogroups_2024-Update
PSME_00006895-RA No alias (at1g22640 : 178.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
Potri.005G186400 No alias myb domain protein 52 0.03 Orthogroups_2024-Update
Potri.007G106100 No alias myb domain protein 69 0.05 Orthogroups_2024-Update
Potri.012G082000 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Potri.017G017600 No alias myb domain protein 52 0.03 Orthogroups_2024-Update
Pp1s120_159V6 No alias myb3r-4 (myb domain protein 3r-4) dna binding... 0.02 Orthogroups_2024-Update
Pp1s91_13V6 No alias F24J1.31; myb family transcription factor (MYB105)... 0.02 Orthogroups_2024-Update
Sobic.003G129000.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
Sopen05g003720 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen09g006600 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!