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  5. Brara.A00515.1

Brara.A00515.1


Description : ubiquitin adaptor protein *(TOL)


Gene families : OG_42_0000585 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00515.1
Cluster HCAA Clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
At4g32760 No alias ENTH/VHS/GAT family protein [Source:UniProtKB/TrEMBL;Acc:F4JV51] 0.04 Orthogroups_2024-Update
Bradi2g22420 No alias ENTH/VHS/GAT family protein 0.05 Orthogroups_2024-Update
Brara.F02249.1 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
Glyma.18G210100 No alias ENTH/VHS/GAT family protein 0.04 Orthogroups_2024-Update
HORVU7Hr1G025620.5 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
LOC_Os01g12880 No alias VHS and GAT domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_12709g0010 No alias (at4g32760 : 333.0) ENTH/VHS/GAT family protein;... 0.03 Orthogroups_2024-Update
PSME_00005067-RA No alias (at4g32760 : 354.0) ENTH/VHS/GAT family protein;... 0.03 Orthogroups_2024-Update
Potri.016G131900 No alias ENTH/VHS/GAT family protein 0.04 Orthogroups_2024-Update
Seita.6G008500.1 No alias ubiquitin adaptor protein *(TOL) 0.02 Orthogroups_2024-Update
Solyc09g014790 No alias Pentatricopeptide repeat (PPR) superfamily protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA 16Dec
MF GO:0043130 ubiquitin binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0019781 NEDD8 activating enzyme activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0045116 protein neddylation IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR002014 VHS_dom 3 115
IPR004152 GAT_dom 196 269
No external refs found!