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  5. Brara.A00586.1

Brara.A00586.1


Description : deubiquitinase


Gene families : OG_42_0000597 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000597_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00586.1
Cluster HCAA Clusters: Cluster_391

Target Alias Description ECC score Gene Family Method Actions
Bradi5g17510 No alias PPPDE putative thiol peptidase family protein 0.03 Orthogroups_2024-Update
Cre17.g698100 No alias PPPDE putative thiol peptidase family protein 0.02 Orthogroups_2024-Update
Mp4g10410.1 No alias peptidase (PPPDE) 0.02 Orthogroups_2024-Update
Potri.014G042300 No alias PPPDE putative thiol peptidase family protein 0.04 Orthogroups_2024-Update
Solyc12g089060 No alias PPPDE putative thiol peptidase-like protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 21 155
No external refs found!