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  5. Brara.A00628.1

Brara.A00628.1


Description : component *(ADA1) of SAGA transcription co-activator complex


Gene families : OG_42_0000854 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000854_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00628.1
Cluster HCAA Clusters: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G134500 No alias Function unknown 0.03 Orthogroups_2024-Update
Seita.1G154000.1 No alias component *(ADA1) of SAGA transcription co-activator complex 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044030 regulation of DNA methylation IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 6 264
No external refs found!