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  5. Brara.A00723.1

Brara.A00723.1


Description : PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone methylation complex


Gene families : OG_42_0001253 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00723.1
Cluster HCAA Clusters: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Brara.F02486.1 No alias PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.04 Orthogroups_2024-Update
Brara.H01416.1 No alias PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 Orthogroups_2024-Update
MA_55622g0010 No alias (at4g30200 : 397.0) Encodes a protein with similarity to... 0.03 Orthogroups_2024-Update
PSME_00044254-RA No alias (at4g30200 : 385.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
Sopen07g007420 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR003961 FN3_dom 357 434
IPR032881 Oberon_PHD 133 256
No external refs found!