Description : component *(CPFS5/CFIm25) of Cleavage Factor I (CF-Im) complex
Gene families : OG_42_0002246 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002246_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.A00759.1 | |
Cluster | HCAA Clusters: Cluster_218 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
PSME_00006289-RA | No alias | (at4g25550 : 93.6) Cleavage/polyadenylation specificity... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003729 | mRNA binding | IEA | 16Dec |
CC | GO:0005849 | mRNA cleavage factor complex | IEA | 16Dec |
BP | GO:0006378 | mRNA polyadenylation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Predicted GO |
BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0001101 | response to acid chemical | IEP | Predicted GO |
MF | GO:0003883 | CTP synthase activity | IEP | Predicted GO |
BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0006534 | cysteine metabolic process | IEP | Predicted GO |
BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Predicted GO |
BP | GO:0006563 | L-serine metabolic process | IEP | Predicted GO |
MF | GO:0009001 | serine O-acetyltransferase activity | IEP | Predicted GO |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
BP | GO:0010167 | response to nitrate | IEP | Predicted GO |
BP | GO:0015698 | inorganic anion transport | IEP | Predicted GO |
BP | GO:0015706 | nitrate transport | IEP | Predicted GO |
MF | GO:0016407 | acetyltransferase activity | IEP | Predicted GO |
MF | GO:0016412 | serine O-acyltransferase activity | IEP | Predicted GO |
MF | GO:0016413 | O-acetyltransferase activity | IEP | Predicted GO |
BP | GO:0019344 | cysteine biosynthetic process | IEP | Predicted GO |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Predicted GO |
BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901698 | response to nitrogen compound | IEP | Predicted GO |
BP | GO:1901700 | response to oxygen-containing compound | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016706 | Cleav_polyA_spec_factor_su5 | 25 | 212 |
No external refs found! |