Description : component *(eS30) of small ribosomal-subunit (SSU) proteome
Gene families : OG_42_0002853 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002853_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.A00791.1 | |
Cluster | HCAA Clusters: Cluster_167 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
227173 | No alias | Ribosomal protein S30 family protein | 0.04 | Orthogroups_2024-Update | |
At2g19750 | No alias | 40S ribosomal protein S30... | 0.08 | Orthogroups_2024-Update | |
At4g29390 | No alias | 40S ribosomal protein S30... | 0.07 | Orthogroups_2024-Update | |
Bradi1g48060 | No alias | Ribosomal protein S30 family protein | 0.02 | Orthogroups_2024-Update | |
Brara.C01230.1 | No alias | component *(eS30) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Brara.I04721.1 | No alias | component *(eS30) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Brara.J01095.1 | No alias | component *(eS30) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Cre16.g666301 | No alias | Ribosomal protein S30 family protein | 0.28 | Orthogroups_2024-Update | |
GRMZM2G054012 | No alias | Ribosomal protein S30 family protein | 0.06 | Orthogroups_2024-Update | |
Glyma.01G209400 | No alias | Ribosomal protein S30 family protein | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G027760.1 | No alias | component *(eS30) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
LOC_Os06g07580 | No alias | expressed protein | 0.03 | Orthogroups_2024-Update | |
MA_10432727g0010 | No alias | (at5g56670 : 97.4) Ribosomal protein S30 family protein;... | 0.04 | Orthogroups_2024-Update | |
Mp2g24290.1 | No alias | component RPS30 of SSU proteome | 0.06 | Orthogroups_2024-Update | |
Mp8g09080.1 | No alias | component RPS30 of SSU proteome | 0.06 | Orthogroups_2024-Update | |
PSME_00048165-RA | No alias | no hits & (original description: no original description) | 0.11 | Orthogroups_2024-Update | |
Potri.012G086600 | No alias | Ribosomal protein S30 family protein | 0.05 | Orthogroups_2024-Update | |
Potri.014G147200 | No alias | Ribosomal protein S30 family protein | 0.07 | Orthogroups_2024-Update | |
Potri.015G084700 | No alias | Ribosomal protein S30 family protein | 0.13 | Orthogroups_2024-Update | |
Pp1s22_155V6 | No alias | 40s ribosomal protein s30 | 0.1 | Orthogroups_2024-Update | |
Pp1s22_171V6 | No alias | 40s ribosomal protein s30 | 0.07 | Orthogroups_2024-Update | |
Pp1s283_53V6 | No alias | 40s ribosomal protein s30 | 0.14 | Orthogroups_2024-Update | |
Pp1s97_259V6 | No alias | 40s ribosomal protein s30 | 0.09 | Orthogroups_2024-Update | |
Seita.4G238500.1 | No alias | component *(eS30) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
Solyc08g076340 | No alias | 40S ribosomal protein S30 (AHRD V3.3 *** W9QWZ6_9ROSA) | 0.07 | Orthogroups_2024-Update | |
Solyc12g008700 | No alias | peroxisomal ABC transporter 1 (AHRD V3.3 --* AT4G39850.4) | 0.24 | Orthogroups_2024-Update | |
evm.model.tig00001003.33 | No alias | no hits & (original description: no original description) | 0.2 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006846 | Ribosomal_S30 | 41 | 97 |
No external refs found! |