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  5. Brara.A00811.1

Brara.A00811.1


Description : metabolite transporter *(DTX)


Gene families : OG_42_0000378 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00811.1
Cluster HCAA Clusters: Cluster_334

Target Alias Description ECC score Gene Family Method Actions
111626 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G021690.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
HORVU4Hr1G065660.2 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
Kfl00174_0160 kfl00174_0160_v1.... (at4g29140 : 266.0) MATE efflux family protein;... 0.02 Orthogroups_2024-Update
PSME_00039669-RA No alias (at1g71870 : 421.0) MATE efflux family protein;... 0.03 Orthogroups_2024-Update
PSME_00053363-RA No alias (at1g58340 : 234.0) ZF14; FUNCTIONS IN: antiporter... 0.03 Orthogroups_2024-Update
Sobic.001G320900.1 No alias metabolite transporter *(DTX) 0.05 Orthogroups_2024-Update
Sobic.004G283500.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Sopen01g028120 No alias MatE 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0042910 xenobiotic transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 292 453
IPR002528 MATE_fam 71 229
No external refs found!