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  5. Brara.A00845.1

Brara.A00845.1


Description : component *(PsaE) of PS-I complex


Gene families : OG_42_0005311 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005311_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00845.1
Cluster HCAA Clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
A4A49_36117 No alias photosystem i reaction center subunit iv b, chloroplastic 0.03 Orthogroups_2024-Update
At4g28750 No alias Photosystem I reaction center subunit IV A,... 0.1 Orthogroups_2024-Update
Bradi1g29000 No alias photosystem I subunit E-2 0.03 Orthogroups_2024-Update
Cre10.g420350 No alias photosystem I subunit E-2 0.1 Orthogroups_2024-Update
Glyma.10G042000 No alias photosystem I subunit E-2 0.14 Orthogroups_2024-Update
Glyma.10G042100 No alias photosystem I subunit E-2 0.09 Orthogroups_2024-Update
Glyma.13G129400 No alias photosystem I subunit E-2 0.14 Orthogroups_2024-Update
Glyma.13G129500 No alias photosystem I subunit E-2 0.09 Orthogroups_2024-Update
HORVU5Hr1G113900.2 No alias component *(PsaE) of PS-I complex 0.09 Orthogroups_2024-Update
Kfl00057_0180 kfl00057_0180_v1.1 (p12352|psae_chlre : 88.2) Photosystem I reaction center... 0.11 Orthogroups_2024-Update
LOC_Os07g25430 No alias photosystem I reaction center subunit IV A, chloroplast... 0.07 Orthogroups_2024-Update
Mp1g24020.1 No alias component PsaE of PS-I complex 0.12 Orthogroups_2024-Update
PSME_00050490-RA No alias (q41228|psaea_nicsy : 110.0) Photosystem I reaction... 0.06 Orthogroups_2024-Update
Potri.002G253800 No alias photosystem I subunit E-2 0.04 Orthogroups_2024-Update
Pp1s101_2V6 No alias photosystem i reaction center subunit iv a 0.19 Orthogroups_2024-Update
Pp1s319_36V6 No alias photosystem i reaction center subunit iv a 0.17 Orthogroups_2024-Update
Pp1s334_17V6 No alias photosystem i reaction center subunit iv a 0.15 Orthogroups_2024-Update
Seita.2G117000.1 No alias component *(PsaE) of PS-I complex 0.14 Orthogroups_2024-Update
Sobic.002G119500.3 No alias component *(PsaE) of PS-I complex 0.14 Orthogroups_2024-Update
Solyc06g083680 No alias Photosystem I reaction center subunit IV (AHRD V3.3 ***... 0.09 Orthogroups_2024-Update
Solyc09g063130 No alias Photosystem I reaction center subunit IV (AHRD V3.3 ***... 0.07 Orthogroups_2024-Update
Sopen06g035100 No alias Photosystem I reaction centre subunit IV / PsaE 0.08 Orthogroups_2024-Update
Sopen09g025300 No alias Photosystem I reaction centre subunit IV / PsaE 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA 16Dec
CC GO:0009538 photosystem I reaction center IEA 16Dec
BP GO:0015979 photosynthesis IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003375 PSI_PsaE 82 140
No external refs found!