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  5. Brara.A00897.1

Brara.A00897.1


Description : KANADI-type transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00897.1
Cluster HCAA Clusters: Cluster_337

Target Alias Description ECC score Gene Family Method Actions
442062 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
At5g42630 No alias Probable transcription factor KAN4... 0.03 Orthogroups_2024-Update
Bradi1g07511 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g36710 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.B02368.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.03 Orthogroups_2024-Update
Brara.E00559.1 No alias transcription factor *(CLAUSA) 0.04 Orthogroups_2024-Update
Brara.J02547.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G069525 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G370425 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G183400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G184700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G146600 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G070420.7 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G080530.10 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
LOC_Os02g47190 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g40710 No alias Myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os11g01480 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_1432g0010 No alias (at3g13040 : 86.3) myb-like HTH transcriptional... 0.04 Orthogroups_2024-Update
PSME_00022449-RA No alias (at2g40260 : 137.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
Potri.005G205900 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.006G000800 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Potri.006G191000 No alias myb-like HTH transcriptional regulator family protein 0.04 Orthogroups_2024-Update
Potri.015G031600 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Pp1s73_118V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s8_227V6 No alias T3G21.3; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.8G019800.1 No alias transcription factor *(CLAUSA) 0.04 Orthogroups_2024-Update
Seita.9G419000.1 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G422000.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G106300.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Solyc06g066180 No alias Myb family transcription factor family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc10g076460 No alias MYB-like transcription factor family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen10g035030 No alias MYB-CC type transfactor, LHEQLE motif 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!