Brara.A00901.1

Description : transcriptional regulator *(HsfA1) & HSF-type transcription factor

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.A00901.1
Cluster	HCAA Clusters: Cluster_207

Target	Alias	Description	ECC score	Gene Family Method
107503	No alias	heat shock transcription factor A1D	0.03	Orthogroups_2024-Update
Bradi1g38140	No alias	heat shock transcription factor C1	0.02	Orthogroups_2024-Update
Bradi1g74350	No alias	heat shock transcription factor A6B	0.04	Orthogroups_2024-Update
Bradi5g18680	No alias	heat shock transcription factor B2A	0.02	Orthogroups_2024-Update
GRMZM2G115456	No alias	heat shock factor 3	0.03	Orthogroups_2024-Update
HORVU4Hr1G073650.2	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
HORVU5Hr1G068100.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
HORVU5Hr1G068320.2	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os02g13800	No alias	HSF-type DNA-binding domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g06630	No alias	heat stress transcription factor, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os03g63750	No alias	HSF-type DNA-binding domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g48030	No alias	heat stress transcription factor B-1, putative, expressed	0.03	Orthogroups_2024-Update
MA_10432269g0010	No alias	(at5g16820 : 282.0) Encodes a putative transcription...	0.04	Orthogroups_2024-Update
MA_5374g0010	No alias	(at1g46264 : 191.0) Encodes SCHIZORIZA, a member of Heat...	0.03	Orthogroups_2024-Update
PSME_00053883-RA	No alias	(at1g46264 : 165.0) Encodes SCHIZORIZA, a member of Heat...	0.02	Orthogroups_2024-Update
Potri.004G062300	No alias	heat shock transcription factor A4A	0.02	Orthogroups_2024-Update
Seita.2G282400.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G056400.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G531900.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.001G496200.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G101400.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G170600.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Sopen03g027860	No alias	hypothetical protein	0.02	Orthogroups_2024-Update
Sopen07g029070	No alias	HSF-type DNA-binding	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003333	amino acid transmembrane transport	IEP	Predicted GO
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Predicted GO
MF	GO:0004564	beta-fructofuranosidase activity	IEP	Predicted GO
BP	GO:0006865	amino acid transport	IEP	Predicted GO
MF	GO:0016832	aldehyde-lyase activity	IEP	Predicted GO
BP	GO:0019321	pentose metabolic process	IEP	Predicted GO
BP	GO:0019566	arabinose metabolic process	IEP	Predicted GO
BP	GO:0046373	L-arabinose metabolic process	IEP	Predicted GO
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	Predicted GO
BP	GO:0098656	anion transmembrane transport	IEP	Predicted GO
BP	GO:1903825	organic acid transmembrane transport	IEP	Predicted GO
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	39	128

External Links

No external refs found!

Brara.A00901.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation