Brara.A00927.1

Description : component *(eL32) of large ribosomal-subunit (LSU) proteome

Gene families : OG_42_0001481 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001481_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.A00927.1
Cluster	HCAA Clusters: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
146656	No alias	Ribosomal protein L32e	0.14	Orthogroups_2024-Update
A4A49_20600	No alias	60s ribosomal protein l32-1	0.11	Orthogroups_2024-Update
A4A49_36410	No alias	60s ribosomal protein l32-1	0.12	Orthogroups_2024-Update
A4A49_65839	No alias	60s ribosomal protein l32-1	0.07	Orthogroups_2024-Update
AC197246.3_FG003	No alias	Ribosomal protein L32e	0.12	Orthogroups_2024-Update
Bradi3g40840	No alias	Ribosomal protein L32e	0.13	Orthogroups_2024-Update
Bradi3g40870	No alias	Ribosomal protein L32e	0.13	Orthogroups_2024-Update
Bradi4g34340	No alias	Ribosomal protein L32e	0.02	Orthogroups_2024-Update
Bradi4g34360	No alias	Ribosomal protein L32e	0.03	Orthogroups_2024-Update
Cre06.g289550	No alias	Ribosomal protein L32e	0.12	Orthogroups_2024-Update
GRMZM2G047971	No alias	Ribosomal protein L32e	0.07	Orthogroups_2024-Update
GRMZM2G065868	No alias	Ribosomal protein L32e	0.12	Orthogroups_2024-Update
Glyma.08G114000	No alias	Ribosomal protein L32e	0.07	Orthogroups_2024-Update
Glyma.08G114100	No alias	Ribosomal protein L32e	0.06	Orthogroups_2024-Update
Glyma.11G226800	No alias	Ribosomal protein L32e	0.08	Orthogroups_2024-Update
Glyma.13G051200	No alias	Ribosomal protein L32e	0.1	Orthogroups_2024-Update
Glyma.15G195500	No alias	Ribosomal protein L32e	0.04	Orthogroups_2024-Update
HORVU5Hr1G075420.2	No alias	component *(eL32) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
HORVU5Hr1G075500.3	No alias	component *(eL32) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
HORVU7Hr1G052960.1	No alias	component *(eL32) of large ribosomal-subunit (LSU) proteome	0.1	Orthogroups_2024-Update
Kfl00109_0130	kfl00109_0130_v1.1	(at4g18100 : 201.0) Ribosomal protein L32e; FUNCTIONS...	0.06	Orthogroups_2024-Update
LOC_Os08g41300	No alias	60S ribosomal protein L32, putative, expressed	0.07	Orthogroups_2024-Update
MA_10434621g0010	No alias	(at4g18100 : 206.0) Ribosomal protein L32e; FUNCTIONS...	0.04	Orthogroups_2024-Update
MA_41569g0010	No alias	(at4g18100 : 200.0) Ribosomal protein L32e; FUNCTIONS...	0.04	Orthogroups_2024-Update
Mp7g12480.1	No alias	component RPL32 of LSU proteome component	0.07	Orthogroups_2024-Update
PSME_00016744-RA	No alias	(at4g18100 : 206.0) Ribosomal protein L32e; FUNCTIONS...	0.09	Orthogroups_2024-Update
PSME_00048254-RA	No alias	(at4g18100 : 203.0) Ribosomal protein L32e; FUNCTIONS...	0.03	Orthogroups_2024-Update
Potri.001G353900	No alias	Ribosomal protein L32e	0.04	Orthogroups_2024-Update
Potri.002G249000	No alias	Ribosomal protein L32e	0.07	Orthogroups_2024-Update
Potri.014G191000	No alias	Ribosomal protein L32e	0.03	Orthogroups_2024-Update
Pp1s249_85V6	No alias	60s ribosomal protein l32	0.1	Orthogroups_2024-Update
Pp1s505_19V6	No alias	60s ribosomal protein l32	0.15	Orthogroups_2024-Update
Pp1s84_96V6	No alias	60s ribosomal protein l32	0.12	Orthogroups_2024-Update
Pp1s98_19V6	No alias	60s ribosomal protein l32	0.14	Orthogroups_2024-Update
Seita.2G262800.1	No alias	component *(eL32) of large ribosomal-subunit (LSU) proteome	0.14	Orthogroups_2024-Update
Seita.6G217300.1	No alias	component *(eL32) of large ribosomal-subunit (LSU) proteome	0.14	Orthogroups_2024-Update
Seita.6G218600.1	No alias	component *(eL32) of large ribosomal-subunit (LSU) proteome	0.02	Orthogroups_2024-Update
Sobic.002G255100.1	No alias	component *(eL32) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Sobic.002G255300.1	No alias	component *(eL32) of large ribosomal-subunit (LSU) proteome	0.17	Orthogroups_2024-Update
Sobic.007G197800.1	No alias	component *(eL32) of large ribosomal-subunit (LSU) proteome	0.12	Orthogroups_2024-Update
Solyc02g070310	No alias	60S ribosomal protein L32 (AHRD V3.3 *** D7MRE7_ARALL)	0.08	Orthogroups_2024-Update
Solyc08g006900	No alias	60S ribosomal protein L32, putative (AHRD V3.3 *** B9T5H6_RICCO)	0.23	Orthogroups_2024-Update
Sopen02g019400	No alias	Ribosomal protein L32	0.11	Orthogroups_2024-Update
Sopen08g002860	No alias	Ribosomal protein L32	0.19	Orthogroups_2024-Update
evm.model.contig_3468.4	No alias	(at4g18100 : 165.0) Ribosomal protein L32e; FUNCTIONS...	0.2	Orthogroups_2024-Update
evm.model.tig00020554.140	No alias	(at4g18100 : 184.0) Ribosomal protein L32e; FUNCTIONS...	0.11	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003924	GTPase activity	IEP	Predicted GO
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predicted GO
CC	GO:0005741	mitochondrial outer membrane	IEP	Predicted GO
CC	GO:0005759	mitochondrial matrix	IEP	Predicted GO
BP	GO:0006399	tRNA metabolic process	IEP	Predicted GO
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
CC	GO:0030126	COPI vesicle coat	IEP	Predicted GO
CC	GO:0031968	organelle outer membrane	IEP	Predicted GO
CC	GO:0031974	membrane-enclosed lumen	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0043038	amino acid activation	IEP	Predicted GO
BP	GO:0043039	tRNA aminoacylation	IEP	Predicted GO
CC	GO:0043233	organelle lumen	IEP	Predicted GO
CC	GO:0044429	mitochondrial part	IEP	Predicted GO
CC	GO:0070013	intracellular organelle lumen	IEP	Predicted GO
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001515	Ribosomal_L32e	16	122

External Links

No external refs found!

Brara.A00927.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation