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  5. Brara.A00959.1

Brara.A00959.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000462 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000462_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00959.1
Cluster HCAA Clusters: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
156981 No alias O-Glycosyl hydrolases family 17 protein 0.03 Orthogroups_2024-Update
Bradi3g20770 No alias Glycosyl hydrolase superfamily protein 0.02 Orthogroups_2024-Update
Brara.G01316.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
GRMZM2G127117 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G212400 No alias Glycosyl hydrolase superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G316200 No alias Glycosyl hydrolase superfamily protein 0.06 Orthogroups_2024-Update
Glyma.15G093700 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os02g10660 No alias glycosyl hydrolases family 17, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g04080 No alias glycosyl hydrolases family 17, putative, expressed 0.02 Orthogroups_2024-Update
MA_5603g0010 No alias (at1g30080 : 369.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
MA_98924g0010 No alias (at1g32860 : 312.0) Glycosyl hydrolase superfamily... 0.02 Orthogroups_2024-Update
Sobic.010G022500.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 34 352
No external refs found!