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  5. Brara.A01038.1

Brara.A01038.1


Description : pectin acetylesterase *(PAE)


Gene families : OG_42_0000252 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01038.1
Cluster HCAA Clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
At3g05910 No alias Pectin acetylesterase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF6] 0.04 Orthogroups_2024-Update
At4g19420 No alias Pectinacetylesterase family protein [Source:TAIR;Acc:AT4G19420] 0.03 Orthogroups_2024-Update
At5g23870 No alias Pectin acetylesterase 9 [Source:UniProtKB/Swiss-Prot;Acc:B9DFR3] 0.04 Orthogroups_2024-Update
Brara.A01037.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
Brara.F02612.1 No alias pectin acetylesterase *(PAE) 0.04 Orthogroups_2024-Update
GRMZM2G066500 No alias Pectinacetylesterase family protein 0.05 Orthogroups_2024-Update
HORVU3Hr1G116490.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
LOC_Os01g66840 No alias pectinacetylesterase domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g44070 No alias pectinacetylesterase domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00025197-RA No alias (at2g46930 : 463.0) Pectinacetylesterase family protein;... 0.02 Orthogroups_2024-Update
PSME_00027560-RA No alias (at4g19420 : 299.0) Pectinacetylesterase family protein;... 0.02 Orthogroups_2024-Update
Seita.5G153500.1 No alias pectin acetylesterase *(PAE) 0.02 Orthogroups_2024-Update
Sopen08g001800 No alias Pectinacetylesterase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 19 370
No external refs found!