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  5. Brara.A01065.1

Brara.A01065.1


Description : iron/zinc/manganese/cobalt cation transporter *(IRT) & metal cation transporter *(ZIP)


Gene families : OG_42_0000242 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01065.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
A4A49_32895 No alias zinc transporter 5 0.04 Orthogroups_2024-Update
A4A49_62748 No alias putative zinc transporter 10 0.04 Orthogroups_2024-Update
At1g31260 No alias Probable zinc transporter 10... 0.03 Orthogroups_2024-Update
At2g32270 No alias Zinc transporter 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG3] 0.07 Orthogroups_2024-Update
Brara.E01135.1 No alias metal cation transporter *(ZIP) 0.04 Orthogroups_2024-Update
Brara.I01522.1 No alias metal cation transporter *(ZIP) 0.03 Orthogroups_2024-Update
Glyma.15G262800 No alias zinc transporter 1 precursor 0.01 Orthogroups_2024-Update
HORVU2Hr1G025400.1 No alias metal cation transporter *(ZIP) 0.01 Orthogroups_2024-Update
Kfl00274_0050 kfl00274_0050_v1.1 no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
Potri.012G119100 No alias zinc transporter 10 precursor 0.03 Orthogroups_2024-Update
Seita.9G146200.1 No alias metal cation transporter *(ZIP) &... 0.03 Orthogroups_2024-Update
Sobic.006G212200.1 No alias metal cation transporter *(ZIP) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0030001 metal ion transport IEA 16Dec
MF GO:0046873 metal ion transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003689 ZIP 168 336
IPR003689 ZIP 51 153
No external refs found!