Description : RNA editing factor *(MORF)
Gene families : OG_42_0000510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000510_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.A01086.1 | |
Cluster | HCAA Clusters: Cluster_212 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g06790 | No alias | Multiple organellar RNA editing factor 3, mitochondrial... | 0.03 | Orthogroups_2024-Update | |
At4g20020 | No alias | Multiple organellar RNA editing factor 1, mitochondrial... | 0.03 | Orthogroups_2024-Update | |
Bradi1g50640 | No alias | differentiation and greening-like 1 | 0.03 | Orthogroups_2024-Update | |
Bradi3g41430 | No alias | cobalt ion binding | 0.04 | Orthogroups_2024-Update | |
Bradi4g22160 | No alias | Function unknown | 0.05 | Orthogroups_2024-Update | |
Bradi5g20660 | No alias | differentiation and greening-like 1 | 0.03 | Orthogroups_2024-Update | |
Brara.D02132.1 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
Brara.F00767.1 | No alias | RNA editing factor *(MORF) | 0.04 | Orthogroups_2024-Update | |
GRMZM2G003765 | No alias | plastid developmental protein DAG, putative | 0.03 | Orthogroups_2024-Update | |
GRMZM2G383540 | No alias | plastid developmental protein DAG, putative | 0.03 | Orthogroups_2024-Update | |
GRMZM5G808811 | No alias | differentiation and greening-like 1 | 0.03 | Orthogroups_2024-Update | |
Glyma.08G188700 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
Glyma.10G183800 | No alias | differentiation and greening-like 1 | 0.05 | Orthogroups_2024-Update | |
Glyma.12G169200 | No alias | Function unknown | 0.04 | Orthogroups_2024-Update | |
Glyma.12G228400 | No alias | cobalt ion binding | 0.06 | Orthogroups_2024-Update | |
Glyma.13G271400 | No alias | cobalt ion binding | 0.05 | Orthogroups_2024-Update | |
HORVU4Hr1G016440.1 | No alias | RNA editing factor *(MORF) | 0.07 | Orthogroups_2024-Update | |
HORVU7Hr1G008880.2 | No alias | RNA editing factor *(MORF) | 0.04 | Orthogroups_2024-Update | |
LOC_Os06g02600 | No alias | DAG protein, chloroplast precursor, putative, expressed | 0.03 | Orthogroups_2024-Update | |
Potri.008G169900 | No alias | plastid developmental protein DAG, putative | 0.03 | Orthogroups_2024-Update | |
Seita.4G012800.1 | No alias | RNA editing factor *(MORF) | 0.06 | Orthogroups_2024-Update | |
Seita.4G211100.1 | No alias | RNA editing factor *(MORF) | 0.05 | Orthogroups_2024-Update | |
Seita.6G068800.1 | No alias | RNA editing factor *(MORF) | 0.04 | Orthogroups_2024-Update | |
Seita.6G225500.1 | No alias | RNA editing factor *(MORF) | 0.08 | Orthogroups_2024-Update | |
Seita.8G095000.1 | No alias | RNA editing factor *(MORF) | 0.08 | Orthogroups_2024-Update | |
Sobic.001G485600.1 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
Sobic.005G100900.1 | No alias | RNA editing factor *(MORF) | 0.07 | Orthogroups_2024-Update | |
Sobic.006G204100.1 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
Sobic.010G013900.1 | No alias | RNA editing factor *(MORF) | 0.05 | Orthogroups_2024-Update | |
Solyc02g079210 | No alias | DAG protein (AHRD V3.3 *** B6SJX7_MAIZE) | 0.05 | Orthogroups_2024-Update | |
Solyc05g054960 | No alias | Peroxisome biogenesis protein 12 (AHRD V3.3 *** K4C2H2_SOLLC) | 0.05 | Orthogroups_2024-Update | |
Solyc06g008220 | No alias | DAG protein (AHRD V3.3 *** A0A0K9Q0F0_ZOSMR) | 0.05 | Orthogroups_2024-Update | |
Solyc12g014230 | No alias | DAG protein (AHRD V3.3 *** A0A0K9PW98_ZOSMR) | 0.03 | Orthogroups_2024-Update | |
Sopen06g003080 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update | |
Sopen10g003300 | No alias | hypothetical protein | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Predicted GO |
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003674 | molecular_function | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0003909 | DNA ligase activity | IEP | Predicted GO |
MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Predicted GO |
MF | GO:0004018 | N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | IEP | Predicted GO |
MF | GO:0004133 | glycogen debranching enzyme activity | IEP | Predicted GO |
MF | GO:0004134 | 4-alpha-glucanotransferase activity | IEP | Predicted GO |
MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Predicted GO |
CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
BP | GO:0006310 | DNA recombination | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0009117 | nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0016597 | amino acid binding | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Predicted GO |
MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Predicted GO |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Predicted GO |
MF | GO:0016842 | amidine-lyase activity | IEP | Predicted GO |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0019238 | cyclohydrolase activity | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
BP | GO:0019637 | organophosphate metabolic process | IEP | Predicted GO |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
MF | GO:0031406 | carboxylic acid binding | IEP | Predicted GO |
CC | GO:0031968 | organelle outer membrane | IEP | Predicted GO |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
MF | GO:0043177 | organic acid binding | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Predicted GO |
CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |