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  5. Brara.A01110.1

Brara.A01110.1


Description : component *(VPS2/CHMP2) of ESCRT-III complex


Gene families : OG_42_0001019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01110.1
Cluster HCAA Clusters: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
Bradi1g53640 No alias SNF7 family protein 0.03 Orthogroups_2024-Update
Kfl00147_0110 kfl00147_0110_v1.1 (at1g03950 : 185.0) vacuolar protein sorting-associated... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005024 Snf7_fam 18 185
No external refs found!