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Description : Nuclear matrix constituent-like protein 1 (AHRD V3.3 *** E5GCT1_CUCME)
Gene families : OG_42_0001967 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001967_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc03g045050 | |
| Cluster | HCCA clusters: Cluster_97 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g13220 | No alias | nuclear matrix constituent protein-related... | 0.04 | Orthogroups_2024-Update | |
| At1g67230 | No alias | Protein CROWDED NUCLEI 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRT5] | 0.04 | Orthogroups_2024-Update | |
| At1g68790 | No alias | Protein CROWDED NUCLEI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA42] | 0.04 | Orthogroups_2024-Update | |
| At5g65770 | No alias | little nuclei4 [Source:TAIR;Acc:AT5G65770] | 0.04 | Orthogroups_2024-Update | |
| HORVU6Hr1G069560.1 | No alias | nuclear lamina lamin-like protein *(CRWN) | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G308200.1 | No alias | nuclear lamina lamin-like protein *(CRWN) | 0.02 | Orthogroups_2024-Update | |
| Sopen03g009490 | No alias | hypothetical protein | 0.07 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003729 | mRNA binding | IEP | Predicted GO |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
| MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Predicted GO |
| MF | GO:0004061 | arylformamidase activity | IEP | Predicted GO |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | Predicted GO |
| MF | GO:0005542 | folic acid binding | IEP | Predicted GO |
| CC | GO:0005685 | U1 snRNP | IEP | Predicted GO |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | Predicted GO |
| BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
| BP | GO:0006376 | mRNA splice site selection | IEP | Predicted GO |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Predicted GO |
| BP | GO:0006568 | tryptophan metabolic process | IEP | Predicted GO |
| BP | GO:0006569 | tryptophan catabolic process | IEP | Predicted GO |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Predicted GO |
| BP | GO:0006586 | indolalkylamine metabolic process | IEP | Predicted GO |
| BP | GO:0006801 | superoxide metabolic process | IEP | Predicted GO |
| BP | GO:0009063 | cellular amino acid catabolic process | IEP | Predicted GO |
| BP | GO:0009074 | aromatic amino acid family catabolic process | IEP | Predicted GO |
| BP | GO:0009310 | amine catabolic process | IEP | Predicted GO |
| BP | GO:0016054 | organic acid catabolic process | IEP | Predicted GO |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
| BP | GO:0019441 | tryptophan catabolic process to kynurenine | IEP | Predicted GO |
| CC | GO:0019867 | outer membrane | IEP | Predicted GO |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predicted GO |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predicted GO |
| CC | GO:0031968 | organelle outer membrane | IEP | Predicted GO |
| BP | GO:0042180 | cellular ketone metabolic process | IEP | Predicted GO |
| BP | GO:0042402 | cellular biogenic amine catabolic process | IEP | Predicted GO |
| BP | GO:0042430 | indole-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042436 | indole-containing compound catabolic process | IEP | Predicted GO |
| BP | GO:0042537 | benzene-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0044106 | cellular amine metabolic process | IEP | Predicted GO |
| BP | GO:0046218 | indolalkylamine catabolic process | IEP | Predicted GO |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | Predicted GO |
| BP | GO:0070189 | kynurenine metabolic process | IEP | Predicted GO |
| BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predicted GO |
| MF | GO:0072341 | modified amino acid binding | IEP | Predicted GO |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Predicted GO |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predicted GO |
| MF | GO:0098599 | palmitoyl hydrolase activity | IEP | Predicted GO |
| CC | GO:0098805 | whole membrane | IEP | Predicted GO |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Predicted GO |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |