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  5. Brara.A01152.1

Brara.A01152.1


Description : EC_1.1 oxidoreductase acting on CH-OH group of donor


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01152.1
Cluster HCAA Clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
At1g26410 No alias Berberine bridge enzyme-like 6... 0.03 Orthogroups_2024-Update
Bradi4g18970 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Bradi5g17300 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Brara.E00947.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.E00948.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.I01843.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Glyma.05G122000 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G059000 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G080200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.15G133200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.15G134200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.15G134300 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
LOC_Os06g35560 No alias reticuline oxidase-like protein precursor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G459500 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G463300 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Sobic.010G163000.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Solyc02g070120 No alias No description available 0.03 Orthogroups_2024-Update
Solyc02g070130 No alias No description available 0.03 Orthogroups_2024-Update
Sopen09g028470 No alias FAD binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA 16Dec
MF GO:0050660 flavin adenine dinucleotide binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 75 209
IPR012951 BBE 461 518
No external refs found!