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  5. Brara.A01208.1

Brara.A01208.1


Description : regulatory protein *(ASPM) of microtubule minus-end stability


Gene families : OG_42_0005597 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005597_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01208.1
Cluster HCAA Clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
419634 No alias binding;calmodulin binding 0.11 Orthogroups_2024-Update
At4g21820 No alias binding;calmodulin binding [Source:TAIR;Acc:AT4G21820] 0.04 Orthogroups_2024-Update
Glyma.07G259400 No alias binding;calmodulin binding 0.14 Orthogroups_2024-Update
Glyma.17G014900 No alias binding;calmodulin binding 0.08 Orthogroups_2024-Update
Kfl00016_0180 kfl00016_0180_v1.1 (at4g21820 : 156.0) binding;calmodulin binding;... 0.07 Orthogroups_2024-Update
Mp1g06540.1 No alias no hits & (original description: none) 0.04 Orthogroups_2024-Update
Solyc02g080390 No alias No description available 0.1 Orthogroups_2024-Update
Solyc02g080400 No alias Abnormal spindle-like microcephaly-associated-like... 0.11 Orthogroups_2024-Update
Sopen02g025090 No alias IQ calmodulin-binding motif 0.11 Orthogroups_2024-Update
evm.model.tig00001335.3 No alias (at4g21820 : 95.1) binding;calmodulin binding; FUNCTIONS... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 760 780
IPR000048 IQ_motif_EF-hand-BS 933 947
IPR000048 IQ_motif_EF-hand-BS 866 879
IPR000048 IQ_motif_EF-hand-BS 885 899
IPR000048 IQ_motif_EF-hand-BS 1066 1084
IPR000048 IQ_motif_EF-hand-BS 1089 1108
IPR000048 IQ_motif_EF-hand-BS 957 972
IPR001715 CH-domain 425 516
No external refs found!