1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.A01230.1

Brara.A01230.1


Description : calcium-permeable channel *(OSCA)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01230.1
Cluster HCAA Clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
91711 No alias ERD (early-responsive to dehydration stress) family protein 0.02 Orthogroups_2024-Update
At1g10090 No alias Hyperosmolality-gated Ca2+ permeable channel 2.2... 0.03 Orthogroups_2024-Update
At1g11960 No alias Hyperosmolality-gated Ca2+ permeable channel 1.3... 0.03 Orthogroups_2024-Update
At1g30360 No alias Hyperosmolality-gated Ca2+ permeable channel 3.1... 0.03 Orthogroups_2024-Update
At4g15430 No alias CSC1-like protein At4g15430... 0.04 Orthogroups_2024-Update
Brara.E01742.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
GRMZM2G163059 No alias lipases;hydrolases, acting on ester bonds 0.02 Orthogroups_2024-Update
Glyma.01G010100 No alias early-responsive to dehydration stress protein (ERD4) 0.03 Orthogroups_2024-Update
Glyma.13G002200 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
Glyma.20G066800 No alias ERD (early-responsive to dehydration stress) family protein 0.04 Orthogroups_2024-Update
Solyc02g081030 No alias ERD (early-responsive to dehydration stress) family... 0.02 Orthogroups_2024-Update
Sopen02g011660 No alias Domain of unknown function DUF221 0.03 Orthogroups_2024-Update
Sopen08g008540 No alias Domain of unknown function DUF221 0.03 Orthogroups_2024-Update
Sopen09g026510 No alias Domain of unknown function DUF221 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004017 adenylate kinase activity IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 201 363
IPR032880 Csc1_N 7 180
IPR003864 RSN1_7TM 374 646
No external refs found!