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  5. Brara.A01235.1

Brara.A01235.1


Description : component *(SHL/EBS) of PRC1 complex


Gene families : OG_42_0001066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01235.1
Cluster HCAA Clusters: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G119357 No alias PHD finger family protein / bromo-adjacent homology... 0.02 Orthogroups_2024-Update
Pp1s171_11V6 No alias ebs-bah-phd domain-containing protein 0.02 Orthogroups_2024-Update
Sobic.002G192500.1 No alias component *(SHL/EBS) of PRC1 complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 148 196
IPR001025 BAH_dom 31 143
No external refs found!