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  5. Brara.A01291.1

Brara.A01291.1


Description : component *(PGRL1) of cyclic electron flow PGR5-PGRL1 complex


Gene families : OG_42_0003669 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003669_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01291.1
Cluster HCAA Clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G051300 No alias PGR5-LIKE A 0.03 Orthogroups_2024-Update
HORVU5Hr1G124210.5 No alias component *(PGRL1) of cyclic electron flow PGR5-PGRL1 complex 0.03 Orthogroups_2024-Update
LOC_Os03g64020 No alias expressed protein 0.03 Orthogroups_2024-Update
Mp5g09890.1 No alias component PGRL1-like of cyclic electron flow PGR5/PGRL1 complex 0.06 Orthogroups_2024-Update
Seita.9G004200.1 No alias component *(PGRL1) of cyclic electron flow PGR5-PGRL1 complex 0.04 Orthogroups_2024-Update
Sobic.002G112400.1 No alias component *(PGRL1) of cyclic electron flow PGR5-PGRL1 complex 0.05 Orthogroups_2024-Update
Solyc08g007770 No alias Expansin-like protein (AHRD V3.3 *-* Q0WT83_ARATH) 0.05 Orthogroups_2024-Update
Solyc08g080050 No alias PGRL1A transmembrane protein (AHRD V3.3 *** A0A0F7GZP2_9ROSI) 0.11 Orthogroups_2024-Update
evm.model.contig_3389.1 No alias (at4g22890 : 145.0) Encodes PGRL1A, a transmembrane... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!