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  5. Brara.A01388.1

Brara.A01388.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01388.1
Cluster HCAA Clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
A4A49_27803 No alias putative polygalacturonase 0.03 Orthogroups_2024-Update
At3g48950 No alias Endo-polygalacturonase-like protein... 0.03 Orthogroups_2024-Update
Bradi4g05050 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G116400 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G236700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os09g26800 No alias polygalacturonase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G162400 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G131700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G063400 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.008G211500 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.5G229400.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Solyc08g082170 No alias Pectin lyase-like superfamily protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen08g030460 No alias Glycosyl hydrolases family 28 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 129 376
No external refs found!